Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AL008721.1-201ENST00000609964 604 ntBASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AC008267.7-201ENST00000624570 1194 ntBASIC17.01■□□□□ 0.31
LHX6Q9UPM6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 AP002414.3-201ENST00000589352 1468 ntBASIC17■□□□□ 0.31
LHX6Q9UPM6 TP73-AS1-210ENST00000637775 1455 ntBASIC17■□□□□ 0.31
LHX6Q9UPM6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17■□□□□ 0.31
LHX6Q9UPM6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 AC009947.1-201ENST00000444350 727 ntBASIC17■□□□□ 0.31
LHX6Q9UPM6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17■□□□□ 0.31
LHX6Q9UPM6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17■□□□□ 0.31
LHX6Q9UPM6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LHX6Q9UPM6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17■□□□□ 0.31
LHX6Q9UPM6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 RCC2P3-201ENST00000418112 1537 ntBASIC17■□□□□ 0.31
LHX6Q9UPM6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LHX6Q9UPM6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LHX6Q9UPM6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AL691447.1-201ENST00000419456 387 ntBASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC069262.1-201ENST00000539058 672 ntBASIC16.99■□□□□ 0.31
LHX6Q9UPM6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AL109659.2-201ENST00000606809 1674 ntBASIC16.99■□□□□ 0.31
LHX6Q9UPM6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LHX6Q9UPM6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms