Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHA4Q9UN74 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHA4Q9UN74 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 KRT18P1-202ENST00000452408 1331 ntBASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 AP002414.4-201ENST00000589764 1148 ntBASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 NPAP1P7-201ENST00000613027 823 ntBASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHA4Q9UN74 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 DRAXINP1-201ENST00000437611 948 ntBASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 TPSP2-201ENST00000561760 610 ntBASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 MIR3180-1-201ENST00000580374 94 ntBASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 MIR3180-3-201ENST00000584616 94 ntBASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHA4Q9UN74 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.52■□□□□ 0.87
PCDHA4Q9UN74 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA4Q9UN74 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHA4Q9UN74 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHA4Q9UN74 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms