Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SYNPO2Q9UMS6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SYNPO2Q9UMS6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SYNPO2Q9UMS6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SYNPO2Q9UMS6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.64■□□□□ 0.9
SYNPO2Q9UMS6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.64■□□□□ 0.9
SYNPO2Q9UMS6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 SPDYE21P-201ENST00000413323 827 ntBASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 AL590627.1-203ENST00000421194 1026 ntBASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 AC079776.4-201ENST00000511039 504 ntBASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 AC139887.3-201ENST00000568585 713 ntBASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 NKAPP1-205ENST00000585790 367 ntBASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SYNPO2Q9UMS6 AL049757.1-201ENST00000616842 1596 ntBASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 BX276092.7-203ENST00000637198 1536 ntBASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 IL9RP2-201ENST00000423948 1312 ntBASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 AL022326.1-202ENST00000641533 845 ntBASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 KRT18P55-202ENST00000578578 1546 ntBASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SYNPO2Q9UMS6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 AC120114.3-201ENST00000611923 658 ntBASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 AC107918.4-202ENST00000641623 219 ntBASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.62■□□□□ 0.89
SYNPO2Q9UMS6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 LAGE3P1-201ENST00000425356 484 ntBASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SYNPO2Q9UMS6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms