Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC005225.4-201ENST00000557330 545 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 MIR4745-201ENST00000577608 62 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC010654.1-201ENST00000615722 808 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 KRT8P47-201ENST00000604727 1398 ntBASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AC093520.2-201ENST00000561830 333 ntBASIC18.95■□□□□ 0.62
CHD7Q9P2D1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD7Q9P2D1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 RHOQP3-201ENST00000437982 621 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 AC002472.2-201ENST00000442739 958 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 UGT1A2P-201ENST00000454886 866 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 MEIS3P1-201ENST00000495167 958 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 MIR4751-201ENST00000578027 74 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 AC023141.5-201ENST00000458585 616 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD7Q9P2D1 MYLKP1-201ENST00000509077 1580 ntBASIC18.94■□□□□ 0.62
CHD7Q9P2D1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 AC005034.1-201ENST00000426657 489 ntBASIC18.93■□□□□ 0.62
CHD7Q9P2D1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 AL049757.1-201ENST00000616842 1596 ntBASIC18.93■□□□□ 0.62
CHD7Q9P2D1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 AC015911.4-201ENST00000588022 1070 ntBASIC18.93■□□□□ 0.62
CHD7Q9P2D1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 NCF1C-201ENST00000438382 1427 ntBASIC18.93■□□□□ 0.62
CHD7Q9P2D1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 AC004461.1-201ENST00000412461 403 ntBASIC18.93■□□□□ 0.62
CHD7Q9P2D1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD7Q9P2D1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 AC015922.1-201ENST00000421102 1152 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD7Q9P2D1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.92■□□□□ 0.62
CHD7Q9P2D1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms