Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 SPDYE13P-201ENST00000445314 798 ntBASIC15.74■□□□□ 0.11
CDH20Q9HBT6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 AC113404.2-201ENST00000507884 177 ntBASIC15.74■□□□□ 0.11
CDH20Q9HBT6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 GPR32P1-201ENST00000601788 811 ntBASIC15.74■□□□□ 0.11
CDH20Q9HBT6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 AC135776.1-201ENST00000319817 2481 ntBASIC15.74■□□□□ 0.11
CDH20Q9HBT6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH20Q9HBT6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AC005332.1-201ENST00000577698 1310 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 PHGDH-209ENST00000641074 1780 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 IGHGP-201ENST00000390555 1178 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 PCED1CP-201ENST00000419887 785 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 AC093677.2-201ENST00000600169 1863 ntBASIC15.73■□□□□ 0.11
CDH20Q9HBT6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH20Q9HBT6 IER3-202ENST00000376377 1350 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms