Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 AC069148.1-201ENST00000608741 768 ntBASIC16.69■□□□□ 0.26
UBQLN3Q9H347 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBQLN3Q9H347 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 MIR149-201ENST00000384879 89 ntBASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 AC011498.5-201ENST00000592027 486 ntBASIC16.68■□□□□ 0.26
UBQLN3Q9H347 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UBQLN3Q9H347 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBQLN3Q9H347 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms