Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 AL023806.1-201ENST00000603994 1649 ntBASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.92■□□□□ 0.14
COMMD4Q9H0A8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
COMMD4Q9H0A8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 KRT18P29-201ENST00000397031 1267 ntBASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 AC141586.5-201ENST00000624546 2050 ntBASIC15.9■□□□□ 0.14
COMMD4Q9H0A8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
COMMD4Q9H0A8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COMMD4Q9H0A8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms