Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM2Q9C040 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM2Q9C040 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM2Q9C040 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM2Q9C040 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TRIM2Q9C040 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM2Q9C040 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRIM2Q9C040 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM2Q9C040 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 ARMC10P1-201ENST00000313754 855 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 PVRIG2P-201ENST00000435460 978 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 AC104076.2-201ENST00000448912 469 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 DUX4L26-201ENST00000489078 1255 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 DUTP2-201ENST00000519164 463 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 AC141257.4-201ENST00000634557 245 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 AC136944.6-201ENST00000634818 245 ntBASIC16.58■□□□□ 0.24
TRIM2Q9C040 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM2Q9C040 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
TRIM2Q9C040 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM2Q9C040 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM2Q9C040 AC034232.1-201ENST00000506026 1064 ntBASIC16.57■□□□□ 0.24
TRIM2Q9C040 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms