Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 REXO1L11P-201ENST00000620964 1927 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC128676.1-201ENST00000454392 318 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 RPPH1-201ENST00000516869 333 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 C1QBPP2-201ENST00000528754 825 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 KRT18P6-201ENST00000555540 1265 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AC108673.2-201ENST00000608909 565 ntBASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.13□□□□□ -0.95
KRTAP3-1Q9BYR8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 YY1P1-201ENST00000427625 668 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms