Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AC068338.2-201ENST00000563278 1430 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 PP12613-201ENST00000424958 2230 ntBASIC4.87□□□□□ -1.63
LCE3DQ9BYE3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC124283.5-201ENST00000624661 1809 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC046158.3-201ENST00000624947 2558 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AL096828.2-201ENST00000567259 1965 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 LINC00602-201ENST00000629776 2065 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 GPX1P1-201ENST00000388829 606 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 LSM12P1-201ENST00000411836 588 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 KRT18P16-201ENST00000510337 1294 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC005829.2-201ENST00000571422 1056 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AL121906.2-201ENST00000621597 723 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 AC010980.2-201ENST00000587099 1412 ntBASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LCE3DQ9BYE3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms