Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.02□□□□□ -0.01
SSBP3Q9BWW4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SSBP3Q9BWW4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.02□□□□□ -0.01
SSBP3Q9BWW4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AL138781.2-201ENST00000617896 1843 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 LINC00602-201ENST00000629776 2065 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AC246785.2-201ENST00000432512 513 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 NUS1P1-201ENST00000446295 882 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AC074051.2-201ENST00000565115 352 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 AC104581.1-202ENST00000635932 2618 ntBASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.01□□□□□ -0.01
SSBP3Q9BWW4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 LINC00167-201ENST00000530583 1419 ntBASIC15□□□□□ -0.01
SSBP3Q9BWW4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 ABR-217ENST00000572441 563 ntTSL 4 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 ESPNP-201ENST00000270691 2015 ntBASIC15□□□□□ -0.01
SSBP3Q9BWW4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SSBP3Q9BWW4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSBP3Q9BWW4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSBP3Q9BWW4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms