Protein–RNA interactions for Protein: Q9BVL2

NUP58, Nucleoporin p58/p45, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58Q9BVL2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUP58Q9BVL2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUP58Q9BVL2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP58Q9BVL2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 AC010240.3-201ENST00000607688 395 ntBASIC19.65■□□□□ 0.74
NUP58Q9BVL2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 AC116562.4-202ENST00000641738 218 ntBASIC19.65■□□□□ 0.74
NUP58Q9BVL2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP58Q9BVL2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUP58Q9BVL2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 TERF1P1-201ENST00000311003 1181 ntBASIC19.64■□□□□ 0.73
NUP58Q9BVL2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 SLC25A3P1-201ENST00000443844 931 ntBASIC19.64■□□□□ 0.73
NUP58Q9BVL2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 AC022898.2-201ENST00000616822 1312 ntBASIC19.64■□□□□ 0.73
NUP58Q9BVL2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 AC141586.5-201ENST00000624546 2050 ntBASIC19.64■□□□□ 0.73
NUP58Q9BVL2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP58Q9BVL2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 PP12613-201ENST00000424958 2230 ntBASIC19.63■□□□□ 0.73
NUP58Q9BVL2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 AL023806.1-201ENST00000603994 1649 ntBASIC19.63■□□□□ 0.73
NUP58Q9BVL2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 AC007663.1-201ENST00000438948 1240 ntBASIC19.63■□□□□ 0.73
NUP58Q9BVL2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 AC008687.5-201ENST00000593746 558 ntBASIC19.63■□□□□ 0.73
NUP58Q9BVL2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NUP58Q9BVL2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP58Q9BVL2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms