Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.91■□□□□ 0.78
BPIFA3Q9BQP9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 AL355355.2-201ENST00000442321 338 ntBASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 AL118508.1-201ENST00000613502 2345 ntBASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BPIFA3Q9BQP9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BPIFA3Q9BQP9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.89■□□□□ 0.78
BPIFA3Q9BQP9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AC007663.1-201ENST00000438948 1240 ntBASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 DDX43P3-201ENST00000441064 443 ntBASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AC026471.5-201ENST00000615068 467 ntBASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 AC009949.1-201ENST00000623048 1830 ntBASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BPIFA3Q9BQP9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 ITM2C-210ENST00000620962 501 ntBASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BPIFA3Q9BQP9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 AC010653.2-201ENST00000623505 997 ntBASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BPIFA3Q9BQP9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.86■□□□□ 0.77
BPIFA3Q9BQP9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms