Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.68■■□□□ 1.7
SCAF11Q99590 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SCAF11Q99590 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 AC005082.1-201ENST00000413042 2259 ntBASIC25.68■■□□□ 1.7
SCAF11Q99590 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF11Q99590 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF11Q99590 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF11Q99590 AC018845.2-201ENST00000568326 409 ntBASIC25.67■■□□□ 1.7
SCAF11Q99590 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC25.67■■□□□ 1.7
SCAF11Q99590 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF11Q99590 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC25.67■■□□□ 1.7
SCAF11Q99590 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF11Q99590 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SCAF11Q99590 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF11Q99590 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC108073.2-201ENST00000464002 357 ntBASIC25.66■■□□□ 1.7
SCAF11Q99590 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 MED29-202ENST00000594368 1471 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.66■■□□□ 1.7
SCAF11Q99590 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.66■■□□□ 1.7
SCAF11Q99590 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.66■■□□□ 1.7
SCAF11Q99590 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF11Q99590 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SCAF11Q99590 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF11Q99590 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF11Q99590 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF11Q99590 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF11Q99590 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF11Q99590 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF11Q99590 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
SCAF11Q99590 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC25.65■■□□□ 1.7
SCAF11Q99590 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.65■■□□□ 1.7
SCAF11Q99590 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF11Q99590 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF11Q99590 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF11Q99590 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF11Q99590 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF11Q99590 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF11Q99590 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.64■■□□□ 1.7
SCAF11Q99590 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF11Q99590 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF11Q99590 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCAF11Q99590 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SCAF11Q99590 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCAF11Q99590 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF11Q99590 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC25.64■■□□□ 1.69
SCAF11Q99590 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF11Q99590 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF11Q99590 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC25.64■■□□□ 1.69
SCAF11Q99590 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC25.64■■□□□ 1.69
SCAF11Q99590 HCG4B-203ENST00000450128 991 ntBASIC25.64■■□□□ 1.69
SCAF11Q99590 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25.64■■□□□ 1.69
SCAF11Q99590 AC093028.1-201ENST00000622998 982 ntBASIC25.64■■□□□ 1.69
SCAF11Q99590 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF11Q99590 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF11Q99590 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.64■■□□□ 1.69
SCAF11Q99590 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF11Q99590 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SCAF11Q99590 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 SPDYE21P-201ENST00000413323 827 ntBASIC25.63■■□□□ 1.69
SCAF11Q99590 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.63■■□□□ 1.69
SCAF11Q99590 BCRP1-201ENST00000444246 691 ntBASIC25.63■■□□□ 1.69
SCAF11Q99590 COX20P2-201ENST00000452636 358 ntBASIC25.63■■□□□ 1.69
SCAF11Q99590 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.63■■□□□ 1.69
SCAF11Q99590 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
SCAF11Q99590 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF11Q99590 GPR89P-201ENST00000407924 1495 ntBASIC25.63■■□□□ 1.69
SCAF11Q99590 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF11Q99590 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SCAF11Q99590 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF11Q99590 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF11Q99590 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
SCAF11Q99590 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF11Q99590 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF11Q99590 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SCAF11Q99590 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms