Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NOTCH4Q99466 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.43■□□□□ 0.54
NOTCH4Q99466 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 SPDYE21P-201ENST00000413323 827 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC134684.3-201ENST00000641758 218 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC132938.5-201ENST00000624980 1813 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC100803.2-201ENST00000562459 1963 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AC073592.5-201ENST00000624854 528 ntBASIC18.42■□□□□ 0.54
NOTCH4Q99466 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NOTCH4Q99466 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.42■□□□□ 0.54
NOTCH4Q99466 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 MCCD1P2-201ENST00000423228 335 ntBASIC18.41■□□□□ 0.54
NOTCH4Q99466 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 DNAJB3-201ENST00000446806 729 ntBASIC18.41■□□□□ 0.54
NOTCH4Q99466 HCG4B-203ENST00000450128 991 ntBASIC18.41■□□□□ 0.54
NOTCH4Q99466 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
NOTCH4Q99466 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NOTCH4Q99466 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 AC092865.6-201ENST00000642101 219 ntBASIC18.4■□□□□ 0.54
NOTCH4Q99466 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.4■□□□□ 0.54
NOTCH4Q99466 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NOTCH4Q99466 AC004967.1-201ENST00000453589 447 ntBASIC18.4■□□□□ 0.54
NOTCH4Q99466 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
NOTCH4Q99466 PGM5P2-202ENST00000637225 1043 ntBASIC18.4■□□□□ 0.54
NOTCH4Q99466 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms