Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 AC002310.6-201ENST00000624451 1377 ntBASIC18.17■□□□□ 0.5
PHOX2BQ99453 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 ABCD1P5-201ENST00000445663 754 ntBASIC18.16■□□□□ 0.5
PHOX2BQ99453 GAPDHP21-201ENST00000450301 1010 ntBASIC18.16■□□□□ 0.5
PHOX2BQ99453 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 AL606495.2-201ENST00000605867 535 ntBASIC18.16■□□□□ 0.5
PHOX2BQ99453 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHOX2BQ99453 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
PHOX2BQ99453 AP000974.1-201ENST00000623909 2387 ntBASIC18.16■□□□□ 0.5
PHOX2BQ99453 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AC112777.1-201ENST00000540175 1423 ntBASIC18.15■□□□□ 0.5
PHOX2BQ99453 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AL031432.2-201ENST00000566714 459 ntBASIC18.15■□□□□ 0.5
PHOX2BQ99453 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AL928711.1-201ENST00000570165 459 ntBASIC18.15■□□□□ 0.5
PHOX2BQ99453 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PHOX2BQ99453 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHOX2BQ99453 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
PHOX2BQ99453 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.14■□□□□ 0.5
PHOX2BQ99453 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PHOX2BQ99453 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.14■□□□□ 0.5
PHOX2BQ99453 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.14■□□□□ 0.5
PHOX2BQ99453 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 AC116562.4-201ENST00000641316 2276 ntBASIC18.14■□□□□ 0.49
PHOX2BQ99453 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 NKAPP1-205ENST00000585790 367 ntBASIC18.14■□□□□ 0.49
PHOX2BQ99453 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 AL513190.1-201ENST00000621254 727 ntBASIC18.14■□□□□ 0.49
PHOX2BQ99453 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHOX2BQ99453 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.14■□□□□ 0.49
PHOX2BQ99453 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.14■□□□□ 0.49
PHOX2BQ99453 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHOX2BQ99453 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHOX2BQ99453 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHOX2BQ99453 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHOX2BQ99453 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHOX2BQ99453 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PHOX2BQ99453 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms