Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.08■□□□□ 0.96
CDK5RAP2Q96SN8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AC073621.1-201ENST00000392730 636 ntBASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 DUTP2-201ENST00000519164 463 ntBASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AC073592.4-201ENST00000623827 446 ntBASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AP000997.3-201ENST00000623333 2250 ntBASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 AC107918.4-202ENST00000641623 219 ntBASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.07■□□□□ 0.96
CDK5RAP2Q96SN8 REXO1L11P-201ENST00000620964 1927 ntBASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 RNPS1P1-201ENST00000507437 918 ntBASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 REXO1L9P-201ENST00000604264 2108 ntBASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.06■□□□□ 0.96
CDK5RAP2Q96SN8 AP002414.3-201ENST00000589352 1468 ntBASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AC106730.1-201ENST00000566722 1090 ntBASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AC140113.2-201ENST00000604370 208 ntBASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 RPL13AP23-201ENST00000480739 586 ntBASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 AL356488.2-201ENST00000602755 427 ntBASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDK5RAP2Q96SN8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 AC009113.1-201ENST00000570267 2443 ntBASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 BX005266.1-201ENST00000473402 457 ntBASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 AC092910.1-201ENST00000482027 1129 ntBASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 POLD2P1-201ENST00000511220 997 ntBASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 AC109462.3-201ENST00000573934 613 ntBASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDK5RAP2Q96SN8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms