Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.09■□□□□ 0.33
BBS4Q96RK4 KRT18P57-201ENST00000443599 1254 ntBASIC17.09■□□□□ 0.33
BBS4Q96RK4 YBX1P2-201ENST00000489612 999 ntBASIC17.09■□□□□ 0.33
BBS4Q96RK4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.09■□□□□ 0.33
BBS4Q96RK4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BBS4Q96RK4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BBS4Q96RK4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
BBS4Q96RK4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.33
BBS4Q96RK4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.08■□□□□ 0.32
BBS4Q96RK4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BBS4Q96RK4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
BBS4Q96RK4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
BBS4Q96RK4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BBS4Q96RK4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AC073508.3-201ENST00000619697 1419 ntBASIC17.06■□□□□ 0.32
BBS4Q96RK4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 CROCCP1-201ENST00000426910 5675 ntBASIC17.06■□□□□ 0.32
BBS4Q96RK4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AC117947.1-201ENST00000427448 529 ntBASIC17.06■□□□□ 0.32
BBS4Q96RK4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AC024563.2-201ENST00000603282 481 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms