Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 BID-214ENST00000617586 542 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB3IPQ96QF0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AL162430.1-201ENST00000480705 870 ntBASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 AC005181.1-201ENST00000604782 1256 ntBASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB3IPQ96QF0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 LINC02199-201ENST00000506655 2702 ntBASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 KRT8P3-201ENST00000519669 1449 ntBASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB3IPQ96QF0 AC010980.2-201ENST00000587099 1412 ntBASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB3IPQ96QF0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms