Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 MIR4674-201ENST00000582457 87 ntBASIC18.55■□□□□ 0.56
C9orf72Q96LT7 MIR3180-5-201ENST00000583743 153 ntBASIC18.55■□□□□ 0.56
C9orf72Q96LT7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 AC036111.1-201ENST00000533973 1582 ntBASIC18.55■□□□□ 0.56
C9orf72Q96LT7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
C9orf72Q96LT7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.54■□□□□ 0.56
C9orf72Q96LT7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 AC093010.1-201ENST00000473625 1624 ntBASIC18.54■□□□□ 0.56
C9orf72Q96LT7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.54■□□□□ 0.56
C9orf72Q96LT7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 MIR149-201ENST00000384879 89 ntBASIC18.54■□□□□ 0.56
C9orf72Q96LT7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.54■□□□□ 0.56
C9orf72Q96LT7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 LINC01126-201ENST00000623515 1646 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 INGX-201ENST00000359239 846 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 LIN28AP1-201ENST00000429574 405 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 AC010203.1-204ENST00000548782 407 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 AL049597.2-201ENST00000565575 961 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 AC116562.4-202ENST00000641738 218 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 KRT18P55-202ENST00000578578 1546 ntBASIC18.53■□□□□ 0.56
C9orf72Q96LT7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
C9orf72Q96LT7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms