Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 IGHV3-22-201ENST00000520721 359 ntBASIC21.02■□□□□ 0.96
TRIM47Q96LD4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 AC145285.3-201ENST00000564603 959 ntBASIC21.02■□□□□ 0.96
TRIM47Q96LD4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 MTDHP3-201ENST00000594186 672 ntBASIC21.02■□□□□ 0.96
TRIM47Q96LD4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.02■□□□□ 0.95
TRIM47Q96LD4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM47Q96LD4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM47Q96LD4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 AC104581.1-202ENST00000635932 2618 ntBASIC21.01■□□□□ 0.95
TRIM47Q96LD4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 PMS2P2-201ENST00000425039 1128 ntBASIC21.01■□□□□ 0.95
TRIM47Q96LD4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 AC104109.2-201ENST00000602919 1418 ntBASIC21.01■□□□□ 0.95
TRIM47Q96LD4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 WIZP1-201ENST00000531444 2299 ntBASIC21.01■□□□□ 0.95
TRIM47Q96LD4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM47Q96LD4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21■□□□□ 0.95
TRIM47Q96LD4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21■□□□□ 0.95
TRIM47Q96LD4 RPS2P28-201ENST00000314255 741 ntBASIC21■□□□□ 0.95
TRIM47Q96LD4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRIM47Q96LD4 RBM17P3-201ENST00000417687 1192 ntBASIC21■□□□□ 0.95
TRIM47Q96LD4 UPF3AP3-201ENST00000420996 769 ntBASIC21■□□□□ 0.95
TRIM47Q96LD4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21■□□□□ 0.95
TRIM47Q96LD4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21■□□□□ 0.95
TRIM47Q96LD4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 AC027601.4-201ENST00000611259 610 ntBASIC21■□□□□ 0.95
TRIM47Q96LD4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRIM47Q96LD4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRIM47Q96LD4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21■□□□□ 0.95
TRIM47Q96LD4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21■□□□□ 0.95
TRIM47Q96LD4 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.99■□□□□ 0.95
TRIM47Q96LD4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 AC098831.1-202ENST00000438821 336 ntBASIC20.99■□□□□ 0.95
TRIM47Q96LD4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 AL356488.2-201ENST00000602755 427 ntBASIC20.99■□□□□ 0.95
TRIM47Q96LD4 AC140113.2-201ENST00000604370 208 ntBASIC20.99■□□□□ 0.95
TRIM47Q96LD4 AP001269.4-201ENST00000609611 512 ntBASIC20.99■□□□□ 0.95
TRIM47Q96LD4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM47Q96LD4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM47Q96LD4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms