Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 AC068472.1-201ENST00000474589 881 ntBASIC15.11■□□□□ 0.01
TIMD4Q96H15 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 IFNL4P1-201ENST00000607083 540 ntBASIC15.11■□□□□ 0.01
TIMD4Q96H15 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 AC022898.2-201ENST00000616822 1312 ntBASIC15.11■□□□□ 0.01
TIMD4Q96H15 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TIMD4Q96H15 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.11■□□□□ 0.01
TIMD4Q96H15 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC096582.2-201ENST00000510860 516 ntBASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 RN7SL510P-201ENST00000581311 263 ntBASIC15.1■□□□□ 0.01
TIMD4Q96H15 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AL353801.3-201ENST00000609898 542 ntBASIC15.1■□□□□ 0.01
TIMD4Q96H15 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.1■□□□□ 0.01
TIMD4Q96H15 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TIMD4Q96H15 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AC009533.2-201ENST00000543664 586 ntBASIC15.09■□□□□ 0.01
TIMD4Q96H15 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.09■□□□□ 0.01
TIMD4Q96H15 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TIMD4Q96H15 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms