Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.35■□□□□ 0.53
RTP4Q96DX8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTP4Q96DX8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 KRT8P47-201ENST00000604727 1398 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 STARP1-201ENST00000397973 869 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 SPDYE15P-201ENST00000424157 909 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 AC140113.3-201ENST00000605663 199 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 AC139887.4-201ENST00000607877 719 ntBASIC18.34■□□□□ 0.53
RTP4Q96DX8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RTP4Q96DX8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTP4Q96DX8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.33■□□□□ 0.53
RTP4Q96DX8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTP4Q96DX8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTP4Q96DX8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.33■□□□□ 0.53
RTP4Q96DX8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RTP4Q96DX8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RTP4Q96DX8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTP4Q96DX8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTP4Q96DX8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
RTP4Q96DX8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RTP4Q96DX8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 RNF152P1-201ENST00000397754 604 ntBASIC18.33■□□□□ 0.52
RTP4Q96DX8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.33■□□□□ 0.52
RTP4Q96DX8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 DDX43P3-201ENST00000441064 443 ntBASIC18.33■□□□□ 0.52
RTP4Q96DX8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 AC116407.2-201ENST00000613639 860 ntBASIC18.33■□□□□ 0.52
RTP4Q96DX8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTP4Q96DX8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.33■□□□□ 0.52
RTP4Q96DX8 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.52
RTP4Q96DX8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AC011558.1-201ENST00000623459 338 ntBASIC18.32■□□□□ 0.52
RTP4Q96DX8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AC108860.2-201ENST00000562760 2183 ntBASIC18.32■□□□□ 0.52
RTP4Q96DX8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.32■□□□□ 0.52
RTP4Q96DX8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTP4Q96DX8 AC141586.5-201ENST00000624546 2050 ntBASIC18.32■□□□□ 0.52
RTP4Q96DX8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms