Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXRED1Q96CU9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 CROCCP1-201ENST00000426910 5675 ntBASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 MESTP1-201ENST00000404287 994 ntBASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 MFAP1P1-201ENST00000442257 1255 ntBASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 AP003071.4-201ENST00000562276 1284 ntBASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXRED1Q96CU9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 SLC25A1P4-201ENST00000567977 778 ntBASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXRED1Q96CU9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms