Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM54Q969K7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TMEM54Q969K7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 AC087388.1-201ENST00000571370 1112 ntBASIC15.84■□□□□ 0.13
TMEM54Q969K7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TMEM54Q969K7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM54Q969K7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.83■□□□□ 0.13
TMEM54Q969K7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM54Q969K7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM54Q969K7 AC067852.2-201ENST00000590513 2313 ntBASIC15.83■□□□□ 0.12
TMEM54Q969K7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 GUSBP12-201ENST00000513727 720 ntBASIC15.83■□□□□ 0.12
TMEM54Q969K7 KRT8P26-201ENST00000534154 1276 ntBASIC15.83■□□□□ 0.12
TMEM54Q969K7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TMEM54Q969K7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 AC012317.2-201ENST00000623305 2251 ntBASIC15.83■□□□□ 0.12
TMEM54Q969K7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM54Q969K7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TMEM54Q969K7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.82■□□□□ 0.12
TMEM54Q969K7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM54Q969K7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms