Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC132008.2-207ENST00000454517 770 ntBASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 AC005336.2-201ENST00000593183 939 ntBASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 AC120114.3-201ENST00000611923 658 ntBASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 AC135776.1-201ENST00000319817 2481 ntBASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.1■□□□□ 0.81
ATP6V0A1Q93050 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 RCN1P2-201ENST00000398357 915 ntBASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 AL590627.1-203ENST00000421194 1026 ntBASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 DUTP2-201ENST00000519164 463 ntBASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 BX640515.1-201ENST00000617215 977 ntBASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 HCG11-201ENST00000411553 5696 ntBASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.09■□□□□ 0.81
ATP6V0A1Q93050 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 AC022898.2-201ENST00000616822 1312 ntBASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 AP001005.1-201ENST00000571755 1248 ntBASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 AL773604.1-201ENST00000617417 272 ntBASIC20.08■□□□□ 0.81
ATP6V0A1Q93050 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
ATP6V0A1Q93050 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 TP73-AS1-210ENST00000637775 1455 ntBASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 AC008608.2-201ENST00000606089 416 ntBASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0A1Q93050 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP6V0A1Q93050 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms