Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHC3Q92529 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.19■□□□□ 0.66
SHC3Q92529 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SHC3Q92529 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SHC3Q92529 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SHC3Q92529 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.19■□□□□ 0.66
SHC3Q92529 LINC01238-205ENST00000567549 1107 ntBASIC19.19■□□□□ 0.66
SHC3Q92529 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
SHC3Q92529 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.19■□□□□ 0.66
SHC3Q92529 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.19■□□□□ 0.66
SHC3Q92529 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHC3Q92529 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SHC3Q92529 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC3Q92529 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.18■□□□□ 0.66
SHC3Q92529 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC3Q92529 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SHC3Q92529 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC3Q92529 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.18■□□□□ 0.66
SHC3Q92529 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.18■□□□□ 0.66
SHC3Q92529 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SHC3Q92529 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.18■□□□□ 0.66
SHC3Q92529 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 AC009949.1-201ENST00000623048 1830 ntBASIC19.18■□□□□ 0.66
SHC3Q92529 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHC3Q92529 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.17■□□□□ 0.66
SHC3Q92529 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SHC3Q92529 AC112698.1-201ENST00000510299 916 ntBASIC19.17■□□□□ 0.66
SHC3Q92529 KRT18P21-201ENST00000515767 1272 ntBASIC19.17■□□□□ 0.66
SHC3Q92529 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.17■□□□□ 0.66
SHC3Q92529 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 Z83836.1-201ENST00000624605 1642 ntBASIC19.17■□□□□ 0.66
SHC3Q92529 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SHC3Q92529 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.17■□□□□ 0.66
SHC3Q92529 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SHC3Q92529 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.17■□□□□ 0.66
SHC3Q92529 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHC3Q92529 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC3Q92529 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.16■□□□□ 0.66
SHC3Q92529 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC3Q92529 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.16■□□□□ 0.66
SHC3Q92529 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms