Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TRIM41Q8WV44 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 GUSBP12-201ENST00000513727 720 ntBASIC30.7■■■□□ 2.51
TRIM41Q8WV44 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 AC008687.5-201ENST00000593746 558 ntBASIC30.7■■■□□ 2.51
TRIM41Q8WV44 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 AQP6-205ENST00000618286 829 ntTSL 5 BASIC30.7■■■□□ 2.51
TRIM41Q8WV44 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
TRIM41Q8WV44 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC30.7■■■□□ 2.5
TRIM41Q8WV44 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.5
TRIM41Q8WV44 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC30.7■■■□□ 2.5
TRIM41Q8WV44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TRIM41Q8WV44 ESPNP-201ENST00000270691 2015 ntBASIC30.69■■■□□ 2.5
TRIM41Q8WV44 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 CD99-202ENST00000381180 530 ntTSL 2 BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM41Q8WV44 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 BEX3-201ENST00000361298 921 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.68■■■□□ 2.5
TRIM41Q8WV44 AC091607.1-201ENST00000490318 1060 ntBASIC30.68■■■□□ 2.5
TRIM41Q8WV44 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC30.68■■■□□ 2.5
TRIM41Q8WV44 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM41Q8WV44 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 LINC00602-201ENST00000629776 2065 ntBASIC30.67■■■□□ 2.5
TRIM41Q8WV44 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 GMCL1P1-201ENST00000463439 1581 ntBASIC30.67■■■□□ 2.5
TRIM41Q8WV44 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 HIST2H3DP1-201ENST00000401004 416 ntBASIC30.67■■■□□ 2.5
TRIM41Q8WV44 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 AP005901.3-202ENST00000581653 237 ntBASIC30.67■■■□□ 2.5
TRIM41Q8WV44 Z83851.2-201ENST00000609564 659 ntBASIC30.67■■■□□ 2.5
TRIM41Q8WV44 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM41Q8WV44 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 AC004408.2-201ENST00000623613 2777 ntBASIC30.66■■■□□ 2.5
TRIM41Q8WV44 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 RPS2P28-201ENST00000314255 741 ntBASIC30.66■■■□□ 2.5
TRIM41Q8WV44 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM41Q8WV44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms