Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB3IL1Q8TBN0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 AP001094.4-201ENST00000579008 2176 ntBASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 AC133681.1-201ENST00000465482 601 ntBASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 AP003097.1-201ENST00000530657 1135 ntBASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 AL023875.1-201ENST00000640777 796 ntBASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB3IL1Q8TBN0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB3IL1Q8TBN0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AP002982.1-201ENST00000492365 877 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AC130371.2-201ENST00000619443 611 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AL031985.4-201ENST00000642138 673 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 KRT16P1-201ENST00000399124 1418 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 AC124067.4-201ENST00000519691 2379 ntBASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAB3IL1Q8TBN0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 RPS2P4-201ENST00000476944 856 ntBASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAB3IL1Q8TBN0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms