Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 AC034236.2-201ENST00000606662 1610 ntBASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.48■□□□□ 0.23
CNIH3Q8TBE1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 AC004980.1-204ENST00000429707 299 ntBASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 AC008622.2-201ENST00000617006 1229 ntBASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 AL445675.2-201ENST00000620291 557 ntBASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 AC009102.3-201ENST00000623118 1491 ntBASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CNIH3Q8TBE1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 AC098934.4-201ENST00000564127 592 ntBASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 CROCCP1-201ENST00000426910 5675 ntBASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNIH3Q8TBE1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNIH3Q8TBE1 AC100803.2-201ENST00000562459 1963 ntBASIC16.46■□□□□ 0.22
CNIH3Q8TBE1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CNIH3Q8TBE1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.46■□□□□ 0.22
CNIH3Q8TBE1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 CKBP1-201ENST00000565489 1086 ntBASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms