Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.08■□□□□ 0.97
SMARCC2Q8TAQ2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCC2Q8TAQ2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.08■□□□□ 0.96
SMARCC2Q8TAQ2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SMARCC2Q8TAQ2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SMARCC2Q8TAQ2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SMARCC2Q8TAQ2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SMARCC2Q8TAQ2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 MIR662-201ENST00000384847 95 ntBASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCC2Q8TAQ2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 AC100803.2-201ENST00000562459 1963 ntBASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCC2Q8TAQ2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms