Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC010327.4-202ENST00000591484 748 ntBASIC13.95□□□□□ -0.18
LINC01006Q8NI28 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC055717.3-201ENST00000622967 595 ntBASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC073592.4-201ENST00000623827 446 ntBASIC13.95□□□□□ -0.18
LINC01006Q8NI28 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AC010460.3-201ENST00000511359 1579 ntBASIC13.95□□□□□ -0.18
LINC01006Q8NI28 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01006Q8NI28 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 RPSAP43-201ENST00000402237 625 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 GPX1P2-201ENST00000429271 606 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 MIR3687-2-201ENST00000577708 61 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 AC006557.2-201ENST00000592985 1240 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 MIR3687-1-201ENST00000614492 61 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 MIR1199-201ENST00000621445 119 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 AD001527.2-201ENST00000622994 785 ntBASIC13.94□□□□□ -0.18
LINC01006Q8NI28 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01006Q8NI28 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC126763.1-201ENST00000552015 2118 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 YBX2P1-201ENST00000394192 760 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC007967.2-201ENST00000432613 625 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC103564.2-201ENST00000432853 1299 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC009947.1-201ENST00000444350 727 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 DNAJB3-201ENST00000446806 729 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PRYP5-201ENST00000451909 266 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC005593.1-201ENST00000624894 515 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PGM5P2-202ENST00000637225 1043 ntBASIC13.93□□□□□ -0.18
LINC01006Q8NI28 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01006Q8NI28 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms