Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC148Q8NFR7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 BX276092.5-203ENST00000456199 560 ntBASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC148Q8NFR7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 GUSBP12-201ENST00000513727 720 ntBASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC148Q8NFR7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AC090616.6-201ENST00000582640 721 ntBASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC148Q8NFR7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC148Q8NFR7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms