Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 AC254562.1-201ENST00000417586 456 ntBASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 KRT18P2-201ENST00000447938 1258 ntBASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.97■□□□□ 0.79
ARRDC4Q8NCT1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 AC002310.6-201ENST00000624451 1377 ntBASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 CYMP-203ENST00000474680 1263 ntBASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 RFPL4AP1-201ENST00000530883 850 ntBASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.96■□□□□ 0.79
ARRDC4Q8NCT1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
ARRDC4Q8NCT1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 AL499627.1-201ENST00000569373 2188 ntBASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ARRDC4Q8NCT1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 CRYGEP-201ENST00000412192 528 ntBASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 MIR4469-201ENST00000583919 79 ntBASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ARRDC4Q8NCT1 SIGLEC16-201ENST00000599858 1437 ntBASIC19.93■□□□□ 0.78
ARRDC4Q8NCT1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ARRDC4Q8NCT1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARRDC4Q8NCT1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ARRDC4Q8NCT1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms