Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH20Q8N6Y1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 AC068880.1-201ENST00000507289 2297 ntBASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 LINC00265-3P-201ENST00000447588 903 ntBASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH20Q8N6Y1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 TOB2P1-201ENST00000469761 992 ntBASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 VENTXP7-201ENST00000475503 772 ntBASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 MIR3652-201ENST00000579335 131 ntBASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 AC009154.2-201ENST00000621177 724 ntBASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH20Q8N6Y1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 LINC00602-201ENST00000629776 2065 ntBASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 LINC00167-201ENST00000530583 1419 ntBASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PCDH20Q8N6Y1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms