Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01561Q8N1V8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 AL023803.3-201ENST00000615559 522 ntBASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 FAM197Y4-202ENST00000622692 608 ntBASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 CR769767.2-201ENST00000622735 460 ntBASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 HLA-J-201ENST00000462773 1622 ntBASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01561Q8N1V8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 CRYGFP-201ENST00000418459 633 ntBASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 CCR12P-201ENST00000446203 998 ntBASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 AC108860.2-201ENST00000562760 2183 ntBASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01561Q8N1V8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC01561Q8N1V8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LINC01561Q8N1V8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms