Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLX4Q8IY92 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLX4Q8IY92 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLX4Q8IY92 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLX4Q8IY92 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLX4Q8IY92 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLX4Q8IY92 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLX4Q8IY92 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 MRPL20P1-201ENST00000400819 433 ntBASIC21.78■■□□□ 1.08
SLX4Q8IY92 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 AL096865.1-201ENST00000606796 927 ntBASIC21.78■■□□□ 1.08
SLX4Q8IY92 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLX4Q8IY92 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLX4Q8IY92 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SLX4Q8IY92 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLX4Q8IY92 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLX4Q8IY92 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLX4Q8IY92 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.77■■□□□ 1.07
SLX4Q8IY92 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLX4Q8IY92 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.76■■□□□ 1.07
SLX4Q8IY92 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 RHOQP3-201ENST00000437982 621 ntBASIC21.76■■□□□ 1.07
SLX4Q8IY92 PRSS29P-201ENST00000440800 595 ntBASIC21.76■■□□□ 1.07
SLX4Q8IY92 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLX4Q8IY92 ADH5P3-201ENST00000433842 1137 ntBASIC21.76■■□□□ 1.07
SLX4Q8IY92 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.76■■□□□ 1.07
SLX4Q8IY92 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.75■■□□□ 1.07
SLX4Q8IY92 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLX4Q8IY92 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLX4Q8IY92 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms