Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUDCD3Q8IVD9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUDCD3Q8IVD9 NKILA-202ENST00000614771 2598 ntBASIC17.89■□□□□ 0.46
NUDCD3Q8IVD9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
NUDCD3Q8IVD9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NUDCD3Q8IVD9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NUDCD3Q8IVD9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 AL138688.1-201ENST00000624851 1594 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 C1QBPP2-201ENST00000528754 825 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 RARRES2P10-201ENST00000564312 460 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 CROCCP1-201ENST00000426910 5675 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 HOXB1-202ENST00000577092 1414 ntBASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUDCD3Q8IVD9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 HLA-L-209ENST00000420110 1011 ntBASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 KRT18P23-201ENST00000435622 1283 ntBASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 CA15P1-201ENST00000481698 905 ntBASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 AC006058.3-201ENST00000606217 1069 ntBASIC17.88■□□□□ 0.45
NUDCD3Q8IVD9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms