Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB43Q86YS6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB43Q86YS6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
RAB43Q86YS6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAB43Q86YS6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
RAB43Q86YS6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC012313.1-201ENST00000593393 3059 ntBASIC17.2■□□□□ 0.34
RAB43Q86YS6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
RAB43Q86YS6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 IGHGP-201ENST00000390555 1178 ntBASIC17.2■□□□□ 0.34
RAB43Q86YS6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB43Q86YS6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB43Q86YS6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 KRT89P-201ENST00000620027 1478 ntBASIC17.19■□□□□ 0.34
RAB43Q86YS6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 AC106820.2-201ENST00000563775 3264 ntBASIC17.19■□□□□ 0.34
RAB43Q86YS6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 Z69720.1-201ENST00000601483 472 ntBASIC17.19■□□□□ 0.34
RAB43Q86YS6 IFNL4P1-201ENST00000607083 540 ntBASIC17.19■□□□□ 0.34
RAB43Q86YS6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RAB43Q86YS6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB43Q86YS6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms