Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 AC073592.3-201ENST00000625118 1834 ntBASIC20.03■□□□□ 0.8
TRIM50Q86XT4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.03■□□□□ 0.8
TRIM50Q86XT4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 AL590627.1-203ENST00000421194 1026 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 AP001005.1-201ENST00000571755 1248 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 MTDHP3-201ENST00000594186 672 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 AL049840.3-201ENST00000602669 611 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 WIZP1-201ENST00000531444 2299 ntBASIC20.02■□□□□ 0.8
TRIM50Q86XT4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM50Q86XT4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM50Q86XT4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
TRIM50Q86XT4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TRIM50Q86XT4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
TRIM50Q86XT4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM50Q86XT4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 AL031284.1-201ENST00000419297 478 ntBASIC20.01■□□□□ 0.79
TRIM50Q86XT4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 AC018712.1-201ENST00000455767 687 ntBASIC20.01■□□□□ 0.79
TRIM50Q86XT4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM50Q86XT4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20■□□□□ 0.79
TRIM50Q86XT4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 AC093503.3-201ENST00000624917 2352 ntBASIC20■□□□□ 0.79
TRIM50Q86XT4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20■□□□□ 0.79
TRIM50Q86XT4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20■□□□□ 0.79
TRIM50Q86XT4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 AF186996.4-201ENST00000467186 377 ntBASIC20■□□□□ 0.79
TRIM50Q86XT4 SLC25A1P1-201ENST00000528351 927 ntBASIC20■□□□□ 0.79
TRIM50Q86XT4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20■□□□□ 0.79
TRIM50Q86XT4 MIR7706-201ENST00000613747 67 ntBASIC20■□□□□ 0.79
TRIM50Q86XT4 AC093010.1-201ENST00000473625 1624 ntBASIC20■□□□□ 0.79
TRIM50Q86XT4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM50Q86XT4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms