Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC006058.3-201ENST00000606217 1069 ntBASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 PKD1P1-201ENST00000458669 6805 ntBASIC15.65■□□□□ 0.1
LRRTM1Q86UE6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 AC132938.6-201ENST00000623828 1655 ntBASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRTM1Q86UE6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AC116562.2-201ENST00000507042 360 ntBASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 KRT18P6-201ENST00000555540 1265 ntBASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 LINC00304-203ENST00000565008 1864 ntBASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
LRRTM1Q86UE6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 AC128676.1-201ENST00000454392 318 ntBASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 RPPH1-201ENST00000516869 333 ntBASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRTM1Q86UE6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms