Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 AC093677.2-201ENST00000600169 1863 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXR1Q6PIV2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 LINC00602-201ENST00000629776 2065 ntBASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 PCDHA1-201ENST00000378133 2726 ntBASIC18.78■□□□□ 0.6
FOXR1Q6PIV2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 MESTP1-201ENST00000404287 994 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 AC011506.1-201ENST00000474329 610 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 AC128688.1-201ENST00000487626 519 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 AC131212.4-201ENST00000623606 975 ntBASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXR1Q6PIV2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXR1Q6PIV2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms