Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 AC009947.2-201ENST00000444014 672 ntBASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 AL024508.2-201ENST00000607749 1894 ntBASIC18.39■□□□□ 0.53
CASC4Q6P4E1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASC4Q6P4E1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 MMP23A-201ENST00000234610 1017 ntBASIC18.38■□□□□ 0.53
CASC4Q6P4E1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 AC010947.1-201ENST00000623454 693 ntBASIC18.38■□□□□ 0.53
CASC4Q6P4E1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASC4Q6P4E1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 ECEL1P2-202ENST00000465689 757 ntBASIC18.37■□□□□ 0.53
CASC4Q6P4E1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CASC4Q6P4E1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASC4Q6P4E1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms