Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC073508.3-201ENST00000619697 1419 ntBASIC16.42■□□□□ 0.22
NIPAL3Q6P499 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 AC006116.8-202ENST00000587620 1550 ntBASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NIPAL3Q6P499 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 BX664615.1-201ENST00000443558 458 ntBASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AC104390.1-201ENST00000555663 520 ntBASIC16.41■□□□□ 0.22
NIPAL3Q6P499 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AL645608.8-201ENST00000606034 2086 ntBASIC16.41■□□□□ 0.22
NIPAL3Q6P499 AC099343.3-201ENST00000605834 2503 ntBASIC16.41■□□□□ 0.22
NIPAL3Q6P499 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 PRORSD1P-202ENST00000563365 2154 ntBASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SDHAP2-201ENST00000455183 2001 ntBASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AC139887.4-201ENST00000607877 719 ntBASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AL031432.5-201ENST00000641059 760 ntBASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AC092865.7-201ENST00000641832 219 ntBASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NIPAL3Q6P499 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
NIPAL3Q6P499 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NIPAL3Q6P499 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms