Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPF38BQ5VTL8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 RN7SL190P-201ENST00000582519 257 ntBASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 AC129492.6-201ENST00000611383 1305 ntBASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRPF38BQ5VTL8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 KRT8P32-201ENST00000512863 1461 ntBASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AC098614.1-201ENST00000368528 745 ntBASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AC097493.3-201ENST00000509725 367 ntBASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AC069120.2-201ENST00000524091 540 ntBASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPF38BQ5VTL8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 KRT8P44-201ENST00000441609 1350 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 AL592309.1-201ENST00000443127 649 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 AC004890.2-204ENST00000481968 304 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 FAM86C2P-203ENST00000528684 1004 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 AC106886.1-201ENST00000568660 600 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 TP53TG3HP-202ENST00000569755 579 ntBASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPF38BQ5VTL8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 SPDYE11-202ENST00000450699 704 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AC092552.1-201ENST00000547243 906 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 RAB43P1-201ENST00000561790 589 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 SPDYE9P-201ENST00000570642 692 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 SPDYE10P-202ENST00000612005 668 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 SPDYE8P-202ENST00000612377 668 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 MIR6727-201ENST00000620702 65 ntBASIC19.35■□□□□ 0.69
PRPF38BQ5VTL8 AL805961.1-202ENST00000641562 540 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms