Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 UNC93B7-201ENST00000509439 705 ntBASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 AC111152.3-201ENST00000569699 673 ntBASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 AL121894.2-201ENST00000602977 491 ntBASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TTC39AQ5SRH9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AL138831.2-201ENST00000606564 490 ntBASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 IFNL4P1-201ENST00000607083 540 ntBASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AL691432.3-201ENST00000621860 400 ntBASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 AC125634.1-201ENST00000438758 1403 ntBASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TTC39AQ5SRH9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 POM121L3P-201ENST00000419331 1163 ntBASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 KRT8P47-201ENST00000604727 1398 ntBASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TTC39AQ5SRH9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TTC39AQ5SRH9 TP73-AS1-210ENST00000637775 1455 ntBASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TTC39AQ5SRH9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms