Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC008687.5-201ENST00000593746 558 ntBASIC15.79■□□□□ 0.12
FREM1Q5H8C1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.79■□□□□ 0.12
FREM1Q5H8C1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 REXO1L11P-201ENST00000620964 1927 ntBASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 KRT16P4-201ENST00000453883 522 ntBASIC15.79■□□□□ 0.12
FREM1Q5H8C1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 REXO1L6P-202ENST00000619970 1078 ntBASIC15.79■□□□□ 0.12
FREM1Q5H8C1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM1Q5H8C1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.78■□□□□ 0.12
FREM1Q5H8C1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 AC096582.2-201ENST00000510860 516 ntBASIC15.78■□□□□ 0.12
FREM1Q5H8C1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 AC138028.4-201ENST00000564984 1845 ntBASIC15.78■□□□□ 0.12
FREM1Q5H8C1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.78■□□□□ 0.12
FREM1Q5H8C1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 NUS1P1-201ENST00000446295 882 ntBASIC15.77■□□□□ 0.12
FREM1Q5H8C1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms