Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RUNDC3AQ59EK9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RUNDC3AQ59EK9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RUNDC3AQ59EK9 AD000864.1-201ENST00000624076 2295 ntBASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 BX088651.1-201ENST00000540551 451 ntBASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RUNDC3AQ59EK9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CCR12P-201ENST00000446203 998 ntBASIC17■□□□□ 0.31
RUNDC3AQ59EK9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RUNDC3AQ59EK9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 AC022211.2-201ENST00000585075 2527 ntBASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 AC007663.1-201ENST00000438948 1240 ntBASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 AC098590.1-201ENST00000468126 897 ntBASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms