Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.97□□□□□ -0.01
ANKRD55Q3KP44 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 AC004980.1-204ENST00000429707 299 ntBASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 AC128676.1-201ENST00000454392 318 ntBASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ANKRD55Q3KP44 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 PCDHB19P-201ENST00000570871 2371 ntBASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
ANKRD55Q3KP44 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 CKBP1-201ENST00000565489 1086 ntBASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 AC008403.3-201ENST00000598924 454 ntBASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 AC008622.2-201ENST00000617006 1229 ntBASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 AC034236.2-201ENST00000606662 1610 ntBASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
ANKRD55Q3KP44 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ANKRD55Q3KP44 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms