Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL10A1Q03692 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.21■□□□□ 0.02
COL10A1Q03692 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL10A1Q03692 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
COL10A1Q03692 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.21■□□□□ 0.02
COL10A1Q03692 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
COL10A1Q03692 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL10A1Q03692 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL10A1Q03692 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
COL10A1Q03692 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 STARP1-201ENST00000397973 869 ntBASIC15.2■□□□□ 0.02
COL10A1Q03692 AK4P3-201ENST00000418260 669 ntBASIC15.2■□□□□ 0.02
COL10A1Q03692 TSPY5P-201ENST00000426936 936 ntBASIC15.2■□□□□ 0.02
COL10A1Q03692 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.2■□□□□ 0.02
COL10A1Q03692 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.2■□□□□ 0.02
COL10A1Q03692 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
COL10A1Q03692 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 AC006011.2-201ENST00000621313 1158 ntBASIC15.2■□□□□ 0.02
COL10A1Q03692 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL10A1Q03692 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.2■□□□□ 0.02
COL10A1Q03692 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL10A1Q03692 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
COL10A1Q03692 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 RNF152P1-201ENST00000397754 604 ntBASIC15.19■□□□□ 0.02
COL10A1Q03692 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.19■□□□□ 0.02
COL10A1Q03692 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 KRT18P21-201ENST00000515767 1272 ntBASIC15.19■□□□□ 0.02
COL10A1Q03692 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.19■□□□□ 0.02
COL10A1Q03692 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.19■□□□□ 0.02
COL10A1Q03692 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.19■□□□□ 0.02
COL10A1Q03692 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 AL136038.4-201ENST00000603606 1261 ntBASIC15.19■□□□□ 0.02
COL10A1Q03692 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 AC079602.3-201ENST00000623931 403 ntBASIC15.19■□□□□ 0.02
COL10A1Q03692 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
COL10A1Q03692 AL391807.1-203ENST00000604392 2365 ntBASIC15.19■□□□□ 0.02
COL10A1Q03692 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.19■□□□□ 0.02
COL10A1Q03692 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
COL10A1Q03692 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
COL10A1Q03692 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms